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DC Field | Value | Language |
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dc.contributor.author | Nathaniel, Bernard | - |
dc.date.accessioned | 2023-12-01T02:03:33Z | - |
dc.date.available | 2023-12-01T02:03:33Z | - |
dc.date.issued | 2023-06-12 | - |
dc.identifier.uri | http://repository.i3l.ac.id/jspui/handle/123456789/920 | - |
dc.description.abstract | Background: FIP-Lrh is a fungal immunomodulatory protein from Tiger Milk Mushroom with immunomodulatory and cytotoxic properties. Its biological properties can be further elucidated with the availability of a crystal structure. However, crystal structures from only four FIPs have been reported so far. As such, previous study at UCSI and MGVI on rFIP-Lrh crystallisation under two conditions gave hexagonal, irregular, and microcrystal structures, which warranted further optimisation. Objectives: To produce recombinant rFIP-Lrh in E. coli BL21 expression system and to optimise conditions for crystallisation of the rFIP-Lrh. Methodology: E. coli FIP-Lrh/pET-28a(+) transformants cultured in LB broth were induced for expression with IPTG. Total cell lysates containing soluble rFIP-Lrh were purified using Ni-NTA affinity chromatography, dialysed, and subjected to further purification using size exclusion chromatography. Protein crystallisation was performed using three screening kits: Crystal Screen TM 1 and 2, PEG/ION Screen TM 1 and 2, and NeXtal Tubes Classics Suite. Further optimisation was performed to obtain a refined crystal structure of rFIP-Lrh. Results: Soluble rFIP-Lrh (14.9 kDa) was successfully produced with a yield of 100 mg/L of expression culture. After a few rounds of screenings, two optimised crystallisation conditions successfully generated orthorhombic crystals: (i) 0.2M potassium sodium tartrate tetrahydrate, 0.1M sodium citrate tribasic dihydrate pH 5.6, 2.0M ammonium sulphate and (ii) 0.2M K/Na tartrate, 0.1M trisodium citrate pH 5.6, 2.0M ammonium sulphate. Conclusion: The project's objectives were achieved. To protect the crystals during storage and subsequent X-ray diffraction analysis, suitable cryoprotectants (such as glycerol and polyethylene glycol) will be used in the future. The X-ray diffraction data obtained can be used to generate the biological 3D structure of FIP-Lrh for further functional analysis. | en_US |
dc.language.iso | en | en_US |
dc.publisher | Indonesia International Institute for Life Sciences | en_US |
dc.relation.ispartofseries | BM 23-011;T202306122 | - |
dc.subject | Tiger Milk Mushroom | en_US |
dc.subject | Fungal Immunomodulatory | en_US |
dc.subject | Protein | en_US |
dc.subject | FIP-Lrh | en_US |
dc.subject | Protein Crystallisation | en_US |
dc.title | Optimisation of Crystal Formation for the recombinant Fungal Immunomodulatory Protein (FIP-Lrh) from Tiger Milk Mushroom | en_US |
dc.type | Thesis | en_US |
Appears in Collections: | Biomedicine |
Files in This Item:
File | Description | Size | Format | |
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Abstract.pdf | Abstract | 4.13 MB | Adobe PDF | View/Open |
BM 23-011_Bernard Nathaniel.pdf Restricted Access | Full Text | 4.16 MB | Adobe PDF | View/Open Request a copy |
Chapter 1.pdf | Chapter 1 | 4.13 MB | Adobe PDF | View/Open |
Cover.pdf | Cover | 4.13 MB | Adobe PDF | View/Open |
References.pdf | References | 4.14 MB | Adobe PDF | View/Open |
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